Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDB4 | DUSP6 | A0A507R5L1 | A0A507QN08 | Curved DNA-binding protein (42 kDa protein). | Dual specificity protein phosphatase. | 0.954 |
CDB4 | EBP2 | A0A507R5L1 | A0A507R464 | Curved DNA-binding protein (42 kDa protein). | rRNA-processing protein and EBNA1-binding protein ebp2. | 0.783 |
CDB4 | MPDQ_001809 | A0A507R5L1 | A0A507QQU0 | Curved DNA-binding protein (42 kDa protein). | CP-type G domain-containing protein. | 0.974 |
CDB4 | MPDQ_004790 | A0A507R5L1 | A0A507QZP6 | Curved DNA-binding protein (42 kDa protein). | Uncharacterized protein. | 0.955 |
CDB4 | MPDQ_006591 | A0A507R5L1 | A0A507R5G6 | Curved DNA-binding protein (42 kDa protein). | 60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. | 0.962 |
CDB4 | NMD3 | A0A507R5L1 | A0A507R4F3 | Curved DNA-binding protein (42 kDa protein). | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.995 |
CDB4 | NOG1 | A0A507R5L1 | A0A507QNJ4 | Curved DNA-binding protein (42 kDa protein). | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
CDB4 | NOP7 | A0A507R5L1 | A0A507QSW4 | Curved DNA-binding protein (42 kDa protein). | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.987 |
CDB4 | SDA1 | A0A507R5L1 | A0A507QPK1 | Curved DNA-binding protein (42 kDa protein). | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.970 |
CDB4 | TIF6 | A0A507R5L1 | A0A507R1N1 | Curved DNA-binding protein (42 kDa protein). | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. | 0.964 |
DUSP6 | CDB4 | A0A507QN08 | A0A507R5L1 | Dual specificity protein phosphatase. | Curved DNA-binding protein (42 kDa protein). | 0.954 |
DUSP6 | MPDQ_001809 | A0A507QN08 | A0A507QQU0 | Dual specificity protein phosphatase. | CP-type G domain-containing protein. | 0.962 |
DUSP6 | MPDQ_004790 | A0A507QN08 | A0A507QZP6 | Dual specificity protein phosphatase. | Uncharacterized protein. | 0.808 |
DUSP6 | MPDQ_006591 | A0A507QN08 | A0A507R5G6 | Dual specificity protein phosphatase. | 60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. | 0.579 |
DUSP6 | NMD3 | A0A507QN08 | A0A507R4F3 | Dual specificity protein phosphatase. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.957 |
DUSP6 | NOG1 | A0A507QN08 | A0A507QNJ4 | Dual specificity protein phosphatase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.723 |
DUSP6 | NOP7 | A0A507QN08 | A0A507QSW4 | Dual specificity protein phosphatase. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.449 |
DUSP6 | SDA1 | A0A507QN08 | A0A507QPK1 | Dual specificity protein phosphatase. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.581 |
DUSP6 | TIF6 | A0A507QN08 | A0A507R1N1 | Dual specificity protein phosphatase. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. | 0.875 |
EBP2 | CDB4 | A0A507R464 | A0A507R5L1 | rRNA-processing protein and EBNA1-binding protein ebp2. | Curved DNA-binding protein (42 kDa protein). | 0.783 |
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