Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC8 | DCD1 | A0A507QQW6 | A0A507R1Z3 | Thymidylate kinase. | Deoxycytidine monophosphate (dCMP) deaminase. | 0.927 |
CDC8 | DFR1 | A0A507QQW6 | A0A507QZ89 | Thymidylate kinase. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.852 |
CDC8 | MPDQ_000608 | A0A507QQW6 | A0A507QTM4 | Thymidylate kinase. | 5_nucleotid_C domain-containing protein; Belongs to the 5'-nucleotidase family. | 0.820 |
CDC8 | MPDQ_001237 | A0A507QQW6 | A0A507QN69 | Thymidylate kinase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.829 |
CDC8 | MPDQ_002491 | A0A507QQW6 | A0A507QMD0 | Thymidylate kinase. | FSH1 domain-containing protein. | 0.852 |
CDC8 | MPDQ_004123 | A0A507QQW6 | A0A507R2I3 | Thymidylate kinase. | Uncharacterized protein. | 0.825 |
CDC8 | NDK1 | A0A507QQW6 | A0A507QP74 | Thymidylate kinase. | Nucleoside diphosphate kinase. | 0.928 |
CDC8 | RNR1 | A0A507QQW6 | A0A507R0L3 | Thymidylate kinase. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.940 |
CDC8 | RNR2 | A0A507QQW6 | A0A507QZ60 | Thymidylate kinase. | Ribonucleotide-diphosphate reductase (RNR), small subunit. | 0.898 |
CDC8 | TMP1 | A0A507QQW6 | A0A507QMA4 | Thymidylate kinase. | Thymidylate synthase. | 0.940 |
DCD1 | CDC8 | A0A507R1Z3 | A0A507QQW6 | Deoxycytidine monophosphate (dCMP) deaminase. | Thymidylate kinase. | 0.927 |
DCD1 | DFR1 | A0A507R1Z3 | A0A507QZ89 | Deoxycytidine monophosphate (dCMP) deaminase. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.790 |
DCD1 | MPDQ_000608 | A0A507R1Z3 | A0A507QTM4 | Deoxycytidine monophosphate (dCMP) deaminase. | 5_nucleotid_C domain-containing protein; Belongs to the 5'-nucleotidase family. | 0.804 |
DCD1 | MPDQ_001237 | A0A507R1Z3 | A0A507QN69 | Deoxycytidine monophosphate (dCMP) deaminase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.616 |
DCD1 | MPDQ_002491 | A0A507R1Z3 | A0A507QMD0 | Deoxycytidine monophosphate (dCMP) deaminase. | FSH1 domain-containing protein. | 0.790 |
DCD1 | MPDQ_004123 | A0A507R1Z3 | A0A507R2I3 | Deoxycytidine monophosphate (dCMP) deaminase. | Uncharacterized protein. | 0.904 |
DCD1 | RNR2 | A0A507R1Z3 | A0A507QZ60 | Deoxycytidine monophosphate (dCMP) deaminase. | Ribonucleotide-diphosphate reductase (RNR), small subunit. | 0.463 |
DCD1 | TMP1 | A0A507R1Z3 | A0A507QMA4 | Deoxycytidine monophosphate (dCMP) deaminase. | Thymidylate synthase. | 0.957 |
DFR1 | CDC8 | A0A507QZ89 | A0A507QQW6 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Thymidylate kinase. | 0.852 |
DFR1 | DCD1 | A0A507QZ89 | A0A507R1Z3 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Deoxycytidine monophosphate (dCMP) deaminase. | 0.790 |
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