STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_000383DUF3533 domain-containing protein. (503 aa)    
Predicted Functional Partners:
MPDQ_006776
Uncharacterized protein.
    
 0.858
IPI3
Pre-rRNA-processing protein ipi3.
   
 0.624
IPI1
rRNA processing protein.
    
 0.599
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.551
RPS14
Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family.
    
  0.529
CAM1
Translation elongation factor EF1B gamma; Belongs to the calmodulin family.
    
  0.504
CDC4_2
SCF ubiquitin ligase complex subunit cdc4.
    
  0.504
MPDQ_004605
Uncharacterized protein.
    
  0.504
MPDQ_006699
CP-type G domain-containing protein.
   
  0.497
MPDQ_004433
APH domain-containing protein.
 
  
   0.493
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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