Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAM1 | CDC4_2 | A0A507QQL1 | A0A507QW97 | Translation elongation factor EF1B gamma; Belongs to the calmodulin family. | SCF ubiquitin ligase complex subunit cdc4. | 0.876 |
CAM1 | MPDQ_000383 | A0A507QQL1 | A0A507QTW7 | Translation elongation factor EF1B gamma; Belongs to the calmodulin family. | DUF3533 domain-containing protein. | 0.504 |
CAM1 | MPDQ_006776 | A0A507QQL1 | A0A507QVW6 | Translation elongation factor EF1B gamma; Belongs to the calmodulin family. | Uncharacterized protein. | 0.845 |
CDC4_2 | CAM1 | A0A507QW97 | A0A507QQL1 | SCF ubiquitin ligase complex subunit cdc4. | Translation elongation factor EF1B gamma; Belongs to the calmodulin family. | 0.876 |
CDC4_2 | MPDQ_000383 | A0A507QW97 | A0A507QTW7 | SCF ubiquitin ligase complex subunit cdc4. | DUF3533 domain-containing protein. | 0.504 |
CDC4_2 | MPDQ_004605 | A0A507QW97 | A0A507R5C5 | SCF ubiquitin ligase complex subunit cdc4. | Uncharacterized protein. | 0.873 |
CDC4_2 | MPDQ_006776 | A0A507QW97 | A0A507QVW6 | SCF ubiquitin ligase complex subunit cdc4. | Uncharacterized protein. | 0.845 |
IPI1 | IPI3 | A0A507R882 | A0A507QKB0 | rRNA processing protein. | Pre-rRNA-processing protein ipi3. | 0.999 |
IPI1 | MPDQ_000383 | A0A507R882 | A0A507QTW7 | rRNA processing protein. | DUF3533 domain-containing protein. | 0.599 |
IPI1 | MPDQ_006699 | A0A507R882 | A0A507QXR4 | rRNA processing protein. | CP-type G domain-containing protein. | 0.955 |
IPI1 | NOP7 | A0A507R882 | A0A507QSW4 | rRNA processing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.854 |
IPI3 | IPI1 | A0A507QKB0 | A0A507R882 | Pre-rRNA-processing protein ipi3. | rRNA processing protein. | 0.999 |
IPI3 | MPDQ_000383 | A0A507QKB0 | A0A507QTW7 | Pre-rRNA-processing protein ipi3. | DUF3533 domain-containing protein. | 0.624 |
IPI3 | MPDQ_006699 | A0A507QKB0 | A0A507QXR4 | Pre-rRNA-processing protein ipi3. | CP-type G domain-containing protein. | 0.978 |
IPI3 | NOP7 | A0A507QKB0 | A0A507QSW4 | Pre-rRNA-processing protein ipi3. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.961 |
MPDQ_000383 | CAM1 | A0A507QTW7 | A0A507QQL1 | DUF3533 domain-containing protein. | Translation elongation factor EF1B gamma; Belongs to the calmodulin family. | 0.504 |
MPDQ_000383 | CDC4_2 | A0A507QTW7 | A0A507QW97 | DUF3533 domain-containing protein. | SCF ubiquitin ligase complex subunit cdc4. | 0.504 |
MPDQ_000383 | IPI1 | A0A507QTW7 | A0A507R882 | DUF3533 domain-containing protein. | rRNA processing protein. | 0.599 |
MPDQ_000383 | IPI3 | A0A507QTW7 | A0A507QKB0 | DUF3533 domain-containing protein. | Pre-rRNA-processing protein ipi3. | 0.624 |
MPDQ_000383 | MPDQ_004433 | A0A507QTW7 | A0A507R121 | DUF3533 domain-containing protein. | APH domain-containing protein. | 0.493 |
page 1 of 3