STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_000309Uncharacterized protein. (215 aa)    
Predicted Functional Partners:
SPT3
Transcription initiation protein spt3.
    
  0.650
MPDQ_003501
Uncharacterized protein.
    
 0.647
MPDQ_004805
SCA7 domain-containing protein.
    
 0.644
MPDQ_007471
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.628
NGG1
Transcriptional regulator.
    
 0.606
TAF12
Transcription initiation factor TFIID subunit 12.
    
 0.597
MPDQ_006137
Uncharacterized protein.
    
  0.590
TAF5
Transcription initiation factor TFIID subunit 5.
    
 0.566
TAF9
Transcription initiation factor TFIID subunit 9.
    
  0.565
TAF6
Transcription initiation factor TFIID subunit 6.
    
 0.563
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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