STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_005933PITH domain-containing protein. (297 aa)    
Predicted Functional Partners:
RPN11
Multicatalytic endopeptidase.
   
 
 0.933
RRI1
COP9 signalosome catalytic subunit rri1.
   
 
 0.861
RPT4
26S proteasome subunit rpt4; Belongs to the AAA ATPase family.
   
   0.695
PSMC3
26S proteasome regulatory subunit 6A; Belongs to the AAA ATPase family.
   
   0.686
MPDQ_005982
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 
  0.675
MPDQ_002490
PCI domain-containing protein.
   
 
 0.673
RPN9
26S proteasome regulatory subunit.
   
 
 0.673
MPDQ_001629
J domain-containing protein.
 
  
 
 0.654
CCT2
T-complex protein 1 subunit beta.
   
  0.645
CCT7
T-complex protein 1 subunit eta.
   
  0.636
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.