Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | GRC3 | A0A507QTG0 | A0A507R3F9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Polynucleotide 5'-hydroxyl-kinase grc3. | 0.815 |
ERB1 | IPI1 | A0A507QTG0 | A0A507R882 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | rRNA processing protein. | 0.806 |
ERB1 | IPI3 | A0A507QTG0 | A0A507QKB0 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pre-rRNA-processing protein ipi3. | 0.976 |
ERB1 | MPDQ_006060 | A0A507QTG0 | A0A507QVG5 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Zn(2)-C6 fungal-type domain-containing protein. | 0.594 |
ERB1 | MPDQ_006699 | A0A507QTG0 | A0A507QXR4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CP-type G domain-containing protein. | 0.997 |
ERB1 | NOP7 | A0A507QTG0 | A0A507QSW4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
GRC3 | ERB1 | A0A507R3F9 | A0A507QTG0 | Polynucleotide 5'-hydroxyl-kinase grc3. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.815 |
GRC3 | IPI1 | A0A507R3F9 | A0A507R882 | Polynucleotide 5'-hydroxyl-kinase grc3. | rRNA processing protein. | 0.932 |
GRC3 | IPI3 | A0A507R3F9 | A0A507QKB0 | Polynucleotide 5'-hydroxyl-kinase grc3. | Pre-rRNA-processing protein ipi3. | 0.980 |
GRC3 | MPDQ_006060 | A0A507R3F9 | A0A507QVG5 | Polynucleotide 5'-hydroxyl-kinase grc3. | Zn(2)-C6 fungal-type domain-containing protein. | 0.579 |
GRC3 | MPDQ_006699 | A0A507R3F9 | A0A507QXR4 | Polynucleotide 5'-hydroxyl-kinase grc3. | CP-type G domain-containing protein. | 0.711 |
GRC3 | NOP7 | A0A507R3F9 | A0A507QSW4 | Polynucleotide 5'-hydroxyl-kinase grc3. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.713 |
IPI1 | ERB1 | A0A507R882 | A0A507QTG0 | rRNA processing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.806 |
IPI1 | GRC3 | A0A507R882 | A0A507R3F9 | rRNA processing protein. | Polynucleotide 5'-hydroxyl-kinase grc3. | 0.932 |
IPI1 | IPI3 | A0A507R882 | A0A507QKB0 | rRNA processing protein. | Pre-rRNA-processing protein ipi3. | 0.999 |
IPI1 | MPDQ_006060 | A0A507R882 | A0A507QVG5 | rRNA processing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.712 |
IPI1 | MPDQ_006699 | A0A507R882 | A0A507QXR4 | rRNA processing protein. | CP-type G domain-containing protein. | 0.955 |
IPI1 | NOP7 | A0A507R882 | A0A507QSW4 | rRNA processing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.854 |
IPI3 | ERB1 | A0A507QKB0 | A0A507QTG0 | Pre-rRNA-processing protein ipi3. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.976 |
IPI3 | GRC3 | A0A507QKB0 | A0A507R3F9 | Pre-rRNA-processing protein ipi3. | Polynucleotide 5'-hydroxyl-kinase grc3. | 0.980 |
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