STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_007650Uncharacterized protein. (718 aa)    
Predicted Functional Partners:
LUC7
Splicing factor.
   
 0.995
MPDQ_002459
RRM domain-containing protein.
   
 
 0.989
MPDQ_005141
zf-U1 domain-containing protein.
   
 
 0.989
SART1
U4/U6.U5 tri-snRNP-associated protein 1.
   
 
 0.985
CBC2
Nuclear cap-binding protein subunit 2.
   
 
 0.984
LEA1
U2 snRNP complex subunit.
   
 
 0.977
PRP5
Pre-mRNA processing RNA-helicase.
   
 0.967
SRRM1
Serine/arginine repetitive matrix protein 1.
   
 0.966
RSE1
Pre-mRNA-splicing factor rse1.
    
 
 0.965
MPDQ_006670
Uncharacterized protein.
  
 
 0.962
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.