STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YKT6Palmitoyltransferase; Belongs to the synaptobrevin family. (200 aa)    
Predicted Functional Partners:
SED5
Cis-Golgi t-SNARE syntaxin.
    
 0.999
SLY1
Vesicle trafficking between the ER and Golgi; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.998
MPDQ_006694
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.996
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.995
BET1
Protein transport protein bet1.
    
 0.994
SEC22
SNAP receptor; Belongs to the synaptobrevin family.
    
 0.993
BOS1
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.990
MPDQ_001286
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.987
MPDQ_007545
t-SNARE coiled-coil homology domain-containing protein.
    
 0.985
MPDQ_007666
t-SNARE coiled-coil homology domain-containing protein.
    
 0.984
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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