Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DBP4 | DCL1 | A0A507QPK9 | A0A507R873 | RNA helicase. | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | 0.595 |
DBP4 | DCL2 | A0A507QPK9 | A0A507QHK1 | RNA helicase. | Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily. | 0.539 |
DBP4 | HAS1 | A0A507QPK9 | A0A507R0C6 | RNA helicase. | RNA helicase. | 0.989 |
DBP4 | MPDQ_004134 | A0A507QPK9 | A0A507QYB4 | RNA helicase. | RNase III domain-containing protein. | 0.617 |
DBP4 | MPDQ_004708 | A0A507QPK9 | A0A507QL88 | RNA helicase. | DUF2439 domain-containing protein. | 0.623 |
DBP4 | MPDQ_007027 | A0A507QPK9 | A0A507QXA0 | RNA helicase. | RNA-dependent RNA polymerase. | 0.516 |
DBP4 | SPB4 | A0A507QPK9 | A0A507R0I8 | RNA helicase. | RNA helicase. | 0.750 |
DCL1 | DBP4 | A0A507R873 | A0A507QPK9 | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.595 |
DCL1 | DCL2 | A0A507R873 | A0A507QHK1 | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily. | 0.557 |
DCL1 | HAS1 | A0A507R873 | A0A507R0C6 | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.437 |
DCL1 | MPDQ_007027 | A0A507R873 | A0A507QXA0 | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | RNA-dependent RNA polymerase. | 0.624 |
DCL1 | SPB4 | A0A507R873 | A0A507R0I8 | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.437 |
DCL2 | DBP4 | A0A507QHK1 | A0A507QPK9 | Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.539 |
DCL2 | DCL1 | A0A507QHK1 | A0A507R873 | Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily. | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | 0.557 |
DCL2 | HAS1 | A0A507QHK1 | A0A507R0C6 | Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.437 |
DCL2 | MPDQ_004290 | A0A507QHK1 | A0A507QLM0 | Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily. | Uncharacterized protein. | 0.525 |
DCL2 | MPDQ_007027 | A0A507QHK1 | A0A507QXA0 | Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily. | RNA-dependent RNA polymerase. | 0.585 |
DCL2 | SPB4 | A0A507QHK1 | A0A507R0I8 | Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily. | RNA helicase. | 0.437 |
HAS1 | DBP4 | A0A507R0C6 | A0A507QPK9 | RNA helicase. | RNA helicase. | 0.989 |
HAS1 | DCL1 | A0A507R0C6 | A0A507R873 | RNA helicase. | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | 0.437 |
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