STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_006872Uncharacterized protein. (653 aa)    
Predicted Functional Partners:
SLU7
mRNA splicing protein.
    
 0.961
MPDQ_000537
WD_REPEATS_REGION domain-containing protein.
   
 0.961
PRP18
mRNA splicing protein prp18.
    
 0.958
CWC22
Pre-mRNA-splicing factor cwc22.
   
 0.956
SUB2_1
Suppressor of the cold-sensitive snRNP bioproteinsis mutant brr1-1.
    
 0.954
SYF2
Pre-mRNA-splicing factor syf2.
    
 0.953
MPDQ_004728
Sas10 domain-containing protein.
   
 0.946
MPDQ_001250
U3 small nucleolar RNA-associated protein 22.
   
  0.939
ECM16
Putative ATP-dependent RNA helicase DHR1.
  
0.939
MPDQ_002995
Uncharacterized protein.
   
 0.939
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.