Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CFD1 | MPDQ_006817 | A0A507QSQ8 | A0A507QXS0 | Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily. | Uncharacterized protein. | 0.475 |
HEM14 | HEM15 | A0A507QK76 | A0A507QUT9 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.995 |
HEM14 | MPDQ_002329 | A0A507QK76 | A0A507QNC3 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. | 0.447 |
HEM14 | MPDQ_006817 | A0A507QK76 | A0A507QXS0 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Uncharacterized protein. | 0.442 |
HEM15 | HEM14 | A0A507QUT9 | A0A507QK76 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.995 |
HEM15 | MDL1 | A0A507QUT9 | A0A507QUK6 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | ATP-binding cassette permease mdl1. | 0.442 |
HEM15 | MPDQ_006817 | A0A507QUT9 | A0A507QXS0 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | Uncharacterized protein. | 0.505 |
MDL1 | HEM15 | A0A507QUK6 | A0A507QUT9 | ATP-binding cassette permease mdl1. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.442 |
MDL1 | MPDQ_006817 | A0A507QUK6 | A0A507QXS0 | ATP-binding cassette permease mdl1. | Uncharacterized protein. | 0.455 |
MPDQ_000089 | MPDQ_006817 | A0A507R894 | A0A507QXS0 | Uncharacterized protein. | Uncharacterized protein. | 0.475 |
MPDQ_000882 | MPDQ_006817 | A0A507R383 | A0A507QXS0 | Uncharacterized protein. | Uncharacterized protein. | 0.421 |
MPDQ_002329 | HEM14 | A0A507QNC3 | A0A507QK76 | Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.447 |
MPDQ_002329 | MPDQ_006817 | A0A507QNC3 | A0A507QXS0 | Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. | Uncharacterized protein. | 0.429 |
MPDQ_004933 | MPDQ_006817 | A0A507QIQ8 | A0A507QXS0 | ATP-grasp domain-containing protein. | Uncharacterized protein. | 0.475 |
MPDQ_006817 | CFD1 | A0A507QXS0 | A0A507QSQ8 | Uncharacterized protein. | Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily. | 0.475 |
MPDQ_006817 | HEM14 | A0A507QXS0 | A0A507QK76 | Uncharacterized protein. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.442 |
MPDQ_006817 | HEM15 | A0A507QXS0 | A0A507QUT9 | Uncharacterized protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.505 |
MPDQ_006817 | MDL1 | A0A507QXS0 | A0A507QUK6 | Uncharacterized protein. | ATP-binding cassette permease mdl1. | 0.455 |
MPDQ_006817 | MPDQ_000089 | A0A507QXS0 | A0A507R894 | Uncharacterized protein. | Uncharacterized protein. | 0.475 |
MPDQ_006817 | MPDQ_000882 | A0A507QXS0 | A0A507R383 | Uncharacterized protein. | Uncharacterized protein. | 0.421 |
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