STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HUL4Putative E3 ubiquitin-protein ligase. (1149 aa)    
Predicted Functional Partners:
SEC31
Protein transport protein S31.
 
      0.844
MPDQ_000804
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.796
MPDQ_004171
Uncharacterized protein.
 
  
 0.767
RAD23B
UV excision repair protein RAD23 B.
    
 0.760
TSC2
Tuberous sclerosis 2-like protein.
    
 0.721
BOI2
Polar growth protein.
    
 0.715
MPDQ_002639
BZIP domain-containing protein.
    
 0.707
UBE2N
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.706
UBA1
E1 ubiquitin-activating protein; Belongs to the ubiquitin-activating E1 family.
   
 0.696
UBC4
Ubiquitin-conjugating enzyme E2 4; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.675
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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