STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL4360S ribosomal protein L43. (92 aa)    
Predicted Functional Partners:
RPL16B
60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
MPDQ_005343
GFO_IDH_MocA domain-containing protein.
   
 
 0.998
RPL17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.998
MPDQ_001874
KOW domain-containing protein.
   
 0.998
RPL25
60S ribosomal protein L25.
   
 
 0.998
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.998
RPS17
40S ribosomal protein S17.
   
 
 0.998
RPS2
40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.998
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.998
RPS13
Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.998
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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