STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSM27Mitochondral 37S ribosomal protein S27. (113 aa)    
Predicted Functional Partners:
MPDQ_002493
Uncharacterized protein.
   
 
 0.971
MRPS5
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.969
MRP4
37S ribosomal protein, mitochondrial.
   
 
 0.966
MPDQ_001253
Uncharacterized protein.
   
   0.956
MRPS12
37S ribosomal protein S12, mitochondrial.
   
 
 0.955
MRP2
40S ribosomal protein mrp2, mitochondrial.
   
 
 0.949
MRPS16
37S ribosomal protein S16, mitochondrial.
   
 
 0.948
RSM24
37S ribosomal protein S24, mitochondrial.
   
 
 0.943
MPDQ_000886
Uncharacterized protein.
   
 
 0.940
MPDQ_007647
Uncharacterized protein.
   
 
 0.939
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.