STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_005506CNH domain-containing protein. (1218 aa)    
Predicted Functional Partners:
MPDQ_002859
E3 ubiquitin-protein ligase PEP5.
   
 0.995
MPDQ_008063
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.995
MPDQ_001817
Pep3_Vps18 domain-containing protein.
   
 0.994
VPS33B
Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.993
VPS41
Vacuolar protein sorting-associated protein 41.
   
 0.993
VAM6
Vacuolar morphoproteinsis protein 6.
    
 
0.960
VPS8
Vacuolar protein sorting-associated protein 8.
   
 
 0.923
MPDQ_001462
Uncharacterized protein.
   
 0.922
RAB17
Ras-protein Rab-17.
    
 
 0.871
MPDQ_001286
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 
 0.860
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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