Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IPI3 | MPDQ_004899 | A0A507QKB0 | A0A507R1J4 | Pre-rRNA-processing protein ipi3. | WD_REPEATS_REGION domain-containing protein. | 0.976 |
IPI3 | MPDQ_005538 | A0A507QKB0 | A0A507R7Y8 | Pre-rRNA-processing protein ipi3. | Uncharacterized protein. | 0.695 |
IPI3 | MPDQ_006699 | A0A507QKB0 | A0A507QXR4 | Pre-rRNA-processing protein ipi3. | CP-type G domain-containing protein. | 0.978 |
IPI3 | NOG1 | A0A507QKB0 | A0A507QNJ4 | Pre-rRNA-processing protein ipi3. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.937 |
IPI3 | NOG2 | A0A507QKB0 | A0A507QRH7 | Pre-rRNA-processing protein ipi3. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.991 |
IPI3 | YTM1 | A0A507QKB0 | A0A507QUE5 | Pre-rRNA-processing protein ipi3. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.961 |
MPDQ_002522 | MPDQ_005538 | A0A507QZR2 | A0A507R7Y8 | Uncharacterized protein. | Uncharacterized protein. | 0.737 |
MPDQ_002522 | POL3 | A0A507QZR2 | A0A507R5N2 | Uncharacterized protein. | DNA polymerase. | 0.999 |
MPDQ_004899 | IPI3 | A0A507R1J4 | A0A507QKB0 | WD_REPEATS_REGION domain-containing protein. | Pre-rRNA-processing protein ipi3. | 0.976 |
MPDQ_004899 | MPDQ_005538 | A0A507R1J4 | A0A507R7Y8 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.838 |
MPDQ_004899 | MPDQ_006699 | A0A507R1J4 | A0A507QXR4 | WD_REPEATS_REGION domain-containing protein. | CP-type G domain-containing protein. | 0.986 |
MPDQ_004899 | NOG1 | A0A507R1J4 | A0A507QNJ4 | WD_REPEATS_REGION domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.988 |
MPDQ_004899 | NOG2 | A0A507R1J4 | A0A507QRH7 | WD_REPEATS_REGION domain-containing protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.985 |
MPDQ_004899 | YTM1 | A0A507R1J4 | A0A507QUE5 | WD_REPEATS_REGION domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.892 |
MPDQ_005538 | IPI3 | A0A507R7Y8 | A0A507QKB0 | Uncharacterized protein. | Pre-rRNA-processing protein ipi3. | 0.695 |
MPDQ_005538 | MPDQ_002522 | A0A507R7Y8 | A0A507QZR2 | Uncharacterized protein. | Uncharacterized protein. | 0.737 |
MPDQ_005538 | MPDQ_004899 | A0A507R7Y8 | A0A507R1J4 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.838 |
MPDQ_005538 | MPDQ_006699 | A0A507R7Y8 | A0A507QXR4 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.676 |
MPDQ_005538 | MUS81 | A0A507R7Y8 | A0A507QJZ9 | Uncharacterized protein. | Crossover junction endonuclease mus81. | 0.714 |
MPDQ_005538 | NOG1 | A0A507R7Y8 | A0A507QNJ4 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.685 |
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