STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4R5XGA1Cyclin-domain-containing protein. (315 aa)    
Predicted Functional Partners:
A0A4Y7PMZ5
SPOC domain-like protein.
    
 0.840
A0A4Y7PRW0
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.787
A0A4Y7QPG4
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.787
A0A4Y7QEN3
Ku DNA-binding complex, Ku70 subunit.
    
 0.760
A0A4Y7PTK2
DNA ligase/mRNA capping enzyme.
    
 0.754
A0A4Y7Q995
DNA ligase.
    
 0.754
A0A4Y7QG35
DNA ligase.
    
 0.697
A0A4Y7QP15
DNA ligase.
    
 0.697
A0A4Y7PQZ9
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
  0.631
A0A4Y7PT31
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.631
Your Current Organism:
Rickenella mellea
NCBI taxonomy Id: 50990
Other names: R. mellea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.