STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7PLP4Uncharacterized protein. (1078 aa)    
Predicted Functional Partners:
A0A4R5XHJ2
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.831
A0A4R5XE31
TFIID-18kDa-domain-containing protein.
    
 
 0.823
A0A4Y7PXT1
Uncharacterized protein.
    
 
 0.816
A0A4R5XED4
Transcription factor TAFII-31.
   
 
 0.815
A0A4Y7Q5M6
SGF29 C-terminal domain-containing protein.
    
 
 0.811
A0A4Y7Q8X9
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.793
A0A4Y7QEG7
TFIID_20kDa domain-containing protein.
    
 
 0.793
A0A4Y7QF91
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.727
A0A4R5XGB4
TAF-domain-containing protein.
    
 
 0.726
A0A4Y7QNR2
TFIID and SAGA subunit.
    
 
 0.721
Your Current Organism:
Rickenella mellea
NCBI taxonomy Id: 50990
Other names: R. mellea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.