STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7PQK8FMN-linked oxidoreductase. (447 aa)    
Predicted Functional Partners:
A0A4Y7QAZ9
Utp21-domain-containing protein.
   
   0.753
A0A4Y7Q9B9
tRNA guanosine-2'-O-methyltransferase.
   
  
 0.745
A0A4Y7Q899
Sas10 domain-containing protein.
   
    0.680
A0A4R5XF15
Bystin-domain-containing protein.
   
    0.675
A0A4Y7QB05
ATP-dependent RNA helicase dbp9.
  
 
 0.675
A0A4Y7QGH4
Brix-domain-containing protein.
   
    0.674
A0A4R5XEP2
Brix-domain-containing protein.
   
    0.673
A0A4Y7QFG8
CBF-domain-containing protein.
   
    0.673
A0A4R5XET8
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.672
A0A4Y7QLX4
WD40 repeat-like protein.
   
    0.672
Your Current Organism:
Rickenella mellea
NCBI taxonomy Id: 50990
Other names: R. mellea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.