Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7PZ95Uncharacterized protein. (231 aa)    
Predicted Functional Partners:
A0A4Y7QK41
BAH domain-containing protein.
    
  0.613
A0A4Y7QFZ9
Uncharacterized protein.
   
   0.582
A0A4Y7Q9G9
F-box domain-containing protein.
    
 0.527
A0A4Y7QG94
Chromo-domain-containing protein.
    
  0.520
A0A4Y7QME9
Chromo domain-containing protein.
    
  0.520
A0A4Y7QMQ6
WD40 repeat-like protein.
    
  0.507
A0A4V3AZL7
WD40 repeat-like protein.
    
  0.504
A0A4Y7QK18
B30.2/SPRY domain-containing protein.
    
  0.504
A0A4Y7PZQ9
WD40 repeat-like protein.
    
  0.503
A0A4Y7PIU5
Uncharacterized protein.
    
  0.483
Your Current Organism:
Rickenella mellea
NCBI taxonomy Id: 50990
Other names: R. mellea
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