STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7QAG3Cytosine-5--methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (769 aa)    
Predicted Functional Partners:
A0A4Y7QJB9
Noc2-domain-containing protein.
   
 
 0.981
A0A4Y7Q298
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.970
A0A4Y7Q7Y6
RNA-binding domain-containing protein.
   
 
 0.963
A0A4Y7PWV9
ARM repeat-containing protein.
   
   0.961
A0A4Y7QL37
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
 
 0.956
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.956
A0A4Y7Q4U0
Ribosomal protein L1.
   
 
 0.952
A0A4Y7PS90
Eukaryotic rRNA processing.
   
 
 0.948
A0A4Y7QCR0
Brix-domain-containing protein.
   
 
 0.946
A0A4R5XFS6
Nop-domain-containing protein.
   
 
 0.944
Your Current Organism:
Rickenella mellea
NCBI taxonomy Id: 50990
Other names: R. mellea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.