STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAME_15188tRNA ligase class II. (176 aa)    
Predicted Functional Partners:
NECAME_15187
Putative aspartate--tRNA ligase.
 
     0.950
NECAME_12601
GatB_Yqey domain-containing protein.
  
 0.905
NECAME_00719
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
 
  
 0.733
NECAME_12369
GMP synthase domain protein.
  
 
 0.696
NECAME_02277
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.654
NECAME_02187
Tetratricopeptide repeat protein.
  
 
 0.654
NECAME_03860
Glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.618
NECAME_15186
Uncharacterized protein.
 
      0.597
NECAME_14660
tRNA ligase class II core domain protein.
  
  
 0.581
NECAME_01073
Delta l-pyrroline-5-carboxylate synthetase.
  
 
 0.574
Your Current Organism:
Necator americanus
NCBI taxonomy Id: 51031
Other names: N. americanus
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