STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAME_12508Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
NECAME_02984
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.897
NECAME_08227
KH domain protein.
   
 0.738
NECAME_06973
Chromo domain-containing protein.
    
 
 0.686
NECAME_12222
Uncharacterized protein.
   
 0.685
NECAME_13190
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.674
NECAME_12824
Zn-finger in Ran binding protein.
   
 0.615
NECAME_09723
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.556
NECAME_06717
Transcription initiation factor IIF, beta subunit.
     
 0.555
NECAME_13919
HnRNP-L/PTB/hephaestus splicing factor family protein.
   
 0.518
NECAME_12321
RRM domain-containing protein.
   
 0.518
Your Current Organism:
Necator americanus
NCBI taxonomy Id: 51031
Other names: N. americanus
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