STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAME_03626Nuclear transport factor 2 domain protein. (466 aa)    
Predicted Functional Partners:
NECAME_08469
Oxidoreductase, short chain dehydrogenase/reductase family protein.
   
 
 0.822
NECAME_04219
LsmAD domain protein.
   
 
 0.695
NECAME_04096
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.659
NECAME_13022
WD domain, G-beta repeat protein.
   
 
 0.619
NECAME_11923
RRM domain-containing protein.
   
 
 0.601
NECAME_16824
DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
   
 
 0.569
NECAME_06944
WD domain, G-beta repeat protein.
   
 
 0.540
NECAME_05732
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.520
NECAME_09225
Uncharacterized protein.
   
 
 0.507
NECAME_01447
NOL1/NOP2/sun family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
    
 
 0.500
Your Current Organism:
Necator americanus
NCBI taxonomy Id: 51031
Other names: N. americanus
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