STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAME_10919Uncharacterized protein. (119 aa)    
Predicted Functional Partners:
NECAME_13122
Uncharacterized protein.
    
 0.861
NECAME_11466
Metallo-beta-lactamase domain protein.
    
 0.861
NECAME_04284
Uncharacterized protein.
   
 0.859
NECAME_10131
PHD-finger.
    
 0.858
NECAME_06632
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.784
NECAME_06087
RNA polymerase Rpb7 protein.
    
 0.778
NECAME_09723
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.769
NECAME_03482
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.763
NECAME_07844
RNA polymerase Rpb5 domain protein.
    
  0.763
NECAME_03343
RNA polymerase Rpb3/Rpb11 dimerization domain protein.
    
  0.757
Your Current Organism:
Necator americanus
NCBI taxonomy Id: 51031
Other names: N. americanus
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