STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAME_03033Zinc finger, C3HC4 type. (449 aa)    
Predicted Functional Partners:
NECAME_13629
Transglutaminase-like protein.
   
 0.944
NECAME_00205
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.939
NECAME_06481
Sel1 repeat protein.
   
 0.890
NECAME_02904
Ubiquitin family protein.
    
 0.834
NECAME_03032
SNARE domain protein; Belongs to the syntaxin family.
 
    
 0.717
NECAME_14167
Uncharacterized protein.
   
 0.716
NECAME_14166
Uncharacterized protein.
   
 0.716
NECAME_17157
Ribosomal protein S27a.
    
 0.701
NECAME_18120
Ribosomal L40e family protein.
    
  0.691
NECAME_04155
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.690
Your Current Organism:
Necator americanus
NCBI taxonomy Id: 51031
Other names: N. americanus
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