Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NECAME_00918 | NECAME_02727 | W2SNG9 | W2TAJ8 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Gemin6 protein. | 0.755 |
NECAME_00918 | NECAME_03940 | W2SNG9 | W2T1G7 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.990 |
NECAME_00918 | NECAME_04390 | W2SNG9 | W2SWK7 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Survival motor neuron protein. | 0.982 |
NECAME_00918 | NECAME_04816 | W2SNG9 | W2SMS6 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Uncharacterized protein. | 0.850 |
NECAME_00918 | NECAME_06624 | W2SNG9 | W2TS69 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | LSM domain protein. | 0.597 |
NECAME_00918 | NECAME_10751 | W2SNG9 | W2TA11 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Uncharacterized protein. | 0.888 |
NECAME_00918 | NECAME_13929 | W2SNG9 | W2SRC3 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Small nuclear ribonucleoprotein Sm D3. | 0.882 |
NECAME_00918 | NECAME_15491 | W2SNG9 | W2SHN0 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | RNA cap guanine-N2 methyltransferase. | 0.722 |
NECAME_00918 | NECAME_15825 | W2SNG9 | W2SHU3 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Small nuclear ribonucleoprotein G. | 0.932 |
NECAME_00918 | NECAME_17792 | W2SNG9 | W2TJ10 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Helicase protein. | 0.858 |
NECAME_02727 | NECAME_00918 | W2TAJ8 | W2SNG9 | Gemin6 protein. | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | 0.755 |
NECAME_02727 | NECAME_03940 | W2TAJ8 | W2T1G7 | Gemin6 protein. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.605 |
NECAME_02727 | NECAME_04390 | W2TAJ8 | W2SWK7 | Gemin6 protein. | Survival motor neuron protein. | 0.676 |
NECAME_02727 | NECAME_04816 | W2TAJ8 | W2SMS6 | Gemin6 protein. | Uncharacterized protein. | 0.502 |
NECAME_02727 | NECAME_06624 | W2TAJ8 | W2TS69 | Gemin6 protein. | LSM domain protein. | 0.498 |
NECAME_02727 | NECAME_10751 | W2TAJ8 | W2TA11 | Gemin6 protein. | Uncharacterized protein. | 0.789 |
NECAME_02727 | NECAME_13929 | W2TAJ8 | W2SRC3 | Gemin6 protein. | Small nuclear ribonucleoprotein Sm D3. | 0.503 |
NECAME_02727 | NECAME_15491 | W2TAJ8 | W2SHN0 | Gemin6 protein. | RNA cap guanine-N2 methyltransferase. | 0.500 |
NECAME_02727 | NECAME_15825 | W2TAJ8 | W2SHU3 | Gemin6 protein. | Small nuclear ribonucleoprotein G. | 0.572 |
NECAME_02727 | NECAME_17792 | W2TAJ8 | W2TJ10 | Gemin6 protein. | Helicase protein. | 0.746 |
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