STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAME_09056tRNA pseudouridine synthase D. (513 aa)    
Predicted Functional Partners:
NECAME_11185
G domain-containing protein.
   
   0.718
NECAME_11106
Ribosomal protein L21.
  
   0.701
NECAME_02795
KOW domain-containing protein.
   
   0.693
NECAME_10954
G domain-containing protein.
   
   0.689
NECAME_01428
L51_S25_CI-B8 domain-containing protein.
   
   0.687
NECAME_12860
Ribosomal protein L11 domain protein; Belongs to the universal ribosomal protein uL11 family.
   
   0.686
NECAME_06820
Uncharacterized protein.
   
    0.677
NECAME_13939
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.672
NECAME_14091
Utp13 specific WD40 associated domain protein.
   
    0.652
NECAME_15121
tRNA pseudouridine synthase.
   
 
 0.646
Your Current Organism:
Necator americanus
NCBI taxonomy Id: 51031
Other names: N. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.