STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO090023000920Uncharacterized protein. (895 aa)    
Predicted Functional Partners:
AO090120000306
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.744
AO090023000997
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.744
AO090010000223
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.728
AO090011000506
Uncharacterized protein.
    
 
 0.718
AO090120000412
Uncharacterized protein.
    
 
 0.707
AO090701000543
KOW domain-containing protein.
    
 
 0.701
AO090701000758
Uncharacterized protein.
    
 
 0.699
AO090003001182
Uncharacterized protein.
    
 0.686
AO090001000583
Ribosomal_L6 domain-containing protein; Belongs to the universal ribosomal protein uL6 family.
    
 
 0.679
AO090023000755
Uncharacterized protein.
    
 
 0.671
Your Current Organism:
Aspergillus oryzae
NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40
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