STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO090001000725Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
AO090011000789
RRM domain-containing protein.
  
 
 0.895
AO090011000041
Uncharacterized protein.
      
 0.780
AO090001000503
Uncharacterized protein.
    
 
 0.732
AO090001000502
Uncharacterized protein.
    
 
 0.732
AO090005001105
Uncharacterized protein.
    
 
 0.708
AO090103000144
Uncharacterized protein.
    
 
 0.586
AO090038000554
Uncharacterized protein.
    
 
 0.586
AO090003001325
Uncharacterized protein.
    
 0.545
AO090001000430
Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 
 0.522
rna14
mRNA 3'-end-processing protein rna14; Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 
 0.517
Your Current Organism:
Aspergillus oryzae
NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40
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