STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO090005001497Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
AO090023000802
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.756
AO090010000311
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.674
sec31
Protein transport protein sec31; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity).
     
 0.658
AO090102000145
L-type lectin-like domain-containing protein.
     
 0.652
AO090701000139
Uncharacterized protein; Belongs to the synaptobrevin family.
     
 0.651
AO090026000428
L-type lectin-like domain-containing protein.
     
 0.651
AO090001000736
DNA_pol_E_B domain-containing protein.
    
   0.648
AO090005000458
Uncharacterized protein.
    
   0.648
AO090009000385
OBG-type G domain-containing protein.
    
   0.648
sec16
COPII coat assembly protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy (By similarity); Belongs to the SEC16 family.
     
 0.634
Your Current Organism:
Aspergillus oryzae
NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.