STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G4U646_NEUT9Uncharacterized protein. (322 aa)    
Predicted Functional Partners:
G4UF51_NEUT9
Trm112p-domain-containing protein.
    
 0.999
G4UH70_NEUT9
Release factor.
  
 
 0.881
G4UP90_NEUT9
Eukaryotic peptide chain release factor subunit 1.
    
 0.870
G4UD85_NEUT9
RF_PROK_I domain-containing protein.
  
 
 0.864
G4V0C6_NEUT9
Putative translation release factor erf3.
    
 0.689
G4UTD4_NEUT9
Putative coproporphyrinogen oxidase.
   
 
 0.687
G4UJ14_NEUT9
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.670
G4UB01_NEUT9
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
    
 0.645
G4V117_NEUT9
Cytidine deaminase-like protein.
     
 0.598
G4UKM0_NEUT9
tRNA guanosine-2'-O-methyltransferase.
      
 0.591
Your Current Organism:
Neurospora tetrasperma
NCBI taxonomy Id: 510952
Other names: N. tetrasperma FGSC 2509, Neurospora tetrasperma FGSC 2509
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