Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G4U5K1_NEUT9 | G4U677_NEUT9 | G4U5K1 | G4U677 | Dor1-like protein. | COG4-domain-containing protein. | 0.998 |
G4U5K1_NEUT9 | G4UQD5_NEUT9 | G4U5K1 | G4UQD5 | Dor1-like protein. | Uncharacterized protein. | 0.693 |
G4U5K1_NEUT9 | G4UVL2_NEUT9 | G4U5K1 | G4UVL2 | Dor1-like protein. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.998 |
G4U5K1_NEUT9 | G4UYE3_NEUT9 | G4U5K1 | G4UYE3 | Dor1-like protein. | Sec34-domain-containing protein. | 0.998 |
G4U677_NEUT9 | G4U5K1_NEUT9 | G4U677 | G4U5K1 | COG4-domain-containing protein. | Dor1-like protein. | 0.998 |
G4U677_NEUT9 | G4UQD5_NEUT9 | G4U677 | G4UQD5 | COG4-domain-containing protein. | Uncharacterized protein. | 0.615 |
G4U677_NEUT9 | G4UVL2_NEUT9 | G4U677 | G4UVL2 | COG4-domain-containing protein. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.997 |
G4U677_NEUT9 | G4UYE3_NEUT9 | G4U677 | G4UYE3 | COG4-domain-containing protein. | Sec34-domain-containing protein. | 0.998 |
G4U951_NEUT9 | G4UD84_NEUT9 | G4U951 | G4UD84 | WH1-domain-containing protein. | Actin, gamma. | 0.958 |
G4U951_NEUT9 | G4UDL5_NEUT9 | G4U951 | G4UDL5 | WH1-domain-containing protein. | Centractin; Belongs to the actin family. | 0.870 |
G4U951_NEUT9 | G4UQD5_NEUT9 | G4U951 | G4UQD5 | WH1-domain-containing protein. | Uncharacterized protein. | 0.598 |
G4U951_NEUT9 | G4UT43_NEUT9 | G4U951 | G4UT43 | WH1-domain-containing protein. | Actin depolymerizing protein; Belongs to the actin-binding proteins ADF family. | 0.615 |
G4U951_NEUT9 | G4UYW4_NEUT9 | G4U951 | G4UYW4 | WH1-domain-containing protein. | Fimbrin. | 0.633 |
G4UD84_NEUT9 | G4U951_NEUT9 | G4UD84 | G4U951 | Actin, gamma. | WH1-domain-containing protein. | 0.958 |
G4UD84_NEUT9 | G4UQD5_NEUT9 | G4UD84 | G4UQD5 | Actin, gamma. | Uncharacterized protein. | 0.585 |
G4UD84_NEUT9 | G4URG5_NEUT9 | G4UD84 | G4URG5 | Actin, gamma. | Actin depolymerizing protein. | 0.859 |
G4UD84_NEUT9 | G4UT43_NEUT9 | G4UD84 | G4UT43 | Actin, gamma. | Actin depolymerizing protein; Belongs to the actin-binding proteins ADF family. | 0.970 |
G4UD84_NEUT9 | G4UYW4_NEUT9 | G4UD84 | G4UYW4 | Actin, gamma. | Fimbrin. | 0.965 |
G4UDL5_NEUT9 | G4U951_NEUT9 | G4UDL5 | G4U951 | Centractin; Belongs to the actin family. | WH1-domain-containing protein. | 0.870 |
G4UDL5_NEUT9 | G4UQD5_NEUT9 | G4UDL5 | G4UQD5 | Centractin; Belongs to the actin family. | Uncharacterized protein. | 0.585 |
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