STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIA84686.1Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
KIA84464.1
Bifunctional cbb3-type cytochrome c oxidase subunit I/II; CcoN/CcoO FixN/FixO; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
  
 0.999
KIA83144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.939
KIA84180.1
Nitrous oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.925
KIA84957.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.886
KIA84181.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.860
KIA82990.1
Cytochrome oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.858
KIA84183.1
Nitrous oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.844
KIA84185.1
Nitrous oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.836
KIA84182.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.835
KIA84184.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.808
Your Current Organism:
Chryseobacterium solincola
NCBI taxonomy Id: 510955
Other names: C. solincola, CCUG 55604, Chryseobacterium solincola Benmalek et al. 2010 emend. Hahnke et al. 2016, Chryseobacterium sp. 1YB-R12, DSM 22468, strain 1YB-R12
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