STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menGUbiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (243 aa)    
Predicted Functional Partners:
menA
1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.911
KIA83075.1
PorT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.822
KIA83873.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
KIA83073.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.645
KIA83711.1
Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvP family.
     
 0.598
KIA84607.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.579
KIA84641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.579
KIA83099.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.579
KIA83694.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.579
KIA82590.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.579
Your Current Organism:
Chryseobacterium solincola
NCBI taxonomy Id: 510955
Other names: C. solincola, CCUG 55604, Chryseobacterium solincola Benmalek et al. 2010 emend. Hahnke et al. 2016, Chryseobacterium sp. 1YB-R12, DSM 22468, strain 1YB-R12
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