STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIA83562.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)    
Predicted Functional Partners:
KIA83178.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.727
KIA82353.1
Gliding motility protein GldC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
  0.640
KIA83300.1
Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.639
KIA84937.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.632
KIA84293.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.627
KIA84964.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
  0.617
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.608
rpsB
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.
   
  0.607
KIA83305.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.607
Your Current Organism:
Chryseobacterium solincola
NCBI taxonomy Id: 510955
Other names: C. solincola, CCUG 55604, Chryseobacterium solincola Benmalek et al. 2010 emend. Hahnke et al. 2016, Chryseobacterium sp. 1YB-R12, DSM 22468, strain 1YB-R12
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