STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO37514.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (732 aa)    
Predicted Functional Partners:
ALO39626.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.744
ALO38545.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.626
ALO38880.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.609
ALO40262.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.567
ALO36999.1
Ferric anguibactin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.554
ALO39834.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.529
ALO37515.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
ALO38400.1
Fe2+-dicitrate sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.518
ALO40507.1
Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.516
ALO39159.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.505
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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