Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO37840.1Cytochrome hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (398 aa)    
Predicted Functional Partners:
ALO38421.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
ALO38624.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.982
ALO38036.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.981
ALO39246.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.981
ALO38663.1
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.937
ALO39875.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.913
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.912
ALO37841.1
8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.889
ALO39969.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.857
bioD
Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
  
 0.838
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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