STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO38095.1Cytochrome C biogenesis protein CcsA; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)    
Predicted Functional Partners:
aauB
Amine dehydrogenase; Oxidizes primary aromatic amines and, more slowly, some long- chain aliphatic amines, but not methylamine or ethylamine. Uses azurin as an electron acceptor to transfer electrons from the reduced tryptophylquinone cofactor.
  
 
 0.871
aauA
Amine dehydrogenase; Oxidizes primary aromatic amines and, more slowly, some long- chain aliphatic amines, but not methylamine or ethylamine. Uses azurin as an electron acceptor to transfer electrons from the reduced tryptophylquinone cofactor.
   
   0.866
ALO37062.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.640
ALO40043.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.588
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
   0.587
ALO36984.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.448
ALO36998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.448
ALO37055.1
Protein nirF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.448
ALO37836.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.448
ALO37891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.448
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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