Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO38829.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)    
Predicted Functional Partners:
ALO37153.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.889
ALO38830.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.884
ALO38622.1
Phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.865
ALO39664.1
Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.816
ALO38663.1
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.794
mhpB
3-(2,3-dihydroxyphenyl)propionate dioxygenase; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family.
    
  0.762
ALO39660.1
PrpF family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.762
ALO39381.1
Ring-hydroxylating dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.744
ALO38624.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.739
benB
Benzoate 1,2-dioxygenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.739
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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