Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO39380.1N-carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)    
Predicted Functional Partners:
ALO39379.1
2,5-dihydroxypyridine 5,6-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.919
ALO39378.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.905
ALO40375.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.847
maiA-2
Asp/Glu racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
 
 0.842
ALO39415.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.826
ALO39416.1
2,5-dihydroxypyridine 5,6-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.659
ALO38698.1
2,5-dihydroxypyridine 5,6-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.655
ALO39377.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.609
ALO39412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.472
ALO37462.1
Peptidase M29; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.462
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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