STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO39416.12,5-dihydroxypyridine 5,6-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
ALO39415.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.971
ALO39417.1
N-carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.920
ALO39925.1
6-hydroxynicotinate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.886
ALO40375.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.882
ALO39378.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.882
maiA-2
Asp/Glu racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
  
 0.813
ALO39414.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.804
ALO38696.1
Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.704
ALO38697.1
N-carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.700
ALO39380.1
N-carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.664
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.