Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO39571.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)    
Predicted Functional Partners:
flgJ
Flagellar biosynthesis protein FlgJ; Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.973
ALO39565.1
Flagellar protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.960
fliS
Flagellar protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.941
fliE
Flagellar hook-basal body protein FliE; Forms a junction between the M-ring and FlgB during flagella biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.937
ALO39567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.914
ALO39564.1
Flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.912
fliO
Flagellar biosynthesis protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.902
ALO39570.1
Flagellar biosynthesis protein FlhB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.902
fliM
Flagellar motor switch protein FliM; With FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.896
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.895
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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