STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO40174.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)    
Predicted Functional Partners:
ALO40175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
ALO40255.1
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
ALO37334.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
ALO37623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
ALO37632.1
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
ALO40173.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
ALO37748.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.468
ALO40055.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
ALO40256.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.