STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_01580Hypothetical protein. (1197 aa)    
Predicted Functional Partners:
CSE_02810
Hypothetical protein.
  
     0.746
CSE_06500
Hypothetical protein.
  
     0.743
CSE_12800
Hypothetical protein.
 
     0.650
CSE_01560
Putative ABC transporter substrate binding protein.
  
    0.621
CSE_01550
Putative ABC transporter permease protein.
       0.620
CSE_01570
Putative ABC transporter ATP-binding protein.
       0.620
CSE_01590
Hypothetical protein.
       0.519
CSE_15240
Hypothetical membrane protein.
 
     0.508
CSE_01610
Hypothetical protein.
 
   
0.500
CSE_07550
Putative polysaccharide pyruvyl transferase.
  
     0.486
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.