STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_01870Hypothetical protein. (178 aa)    
Predicted Functional Partners:
CSE_01880
Hypothetical protein.
       0.773
CSE_01890
Hypothetical protein.
       0.773
npdA
NAD-dependent deacetylase; Protein synonym:regulatory protein SIR2 homolog.
   
    0.542
korB
Putative 2-oxoglutarate ferredoxin oxidoreductase beta subunit.
  
    0.517
korA
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
    0.479
CSE_09210
Hypothetical protein.
 
     0.430
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.