STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_03770Putative cysteine synthase; Protein synonym:O-acetylserine (thiol)-lyase; protein synonym:O-acetylserine sulfhydrylase. (491 aa)    
Predicted Functional Partners:
cysE
Putative serine acetyltransferase.
  
 0.992
CSE_05400
Putative cystathionine beta-lyase; Protein synonym:L-cysteine desulfhydrase; protein synonym:beta C-S lyase.
    
 0.920
cysM
Cysteine synthase; Protein synonym:O-acetylserine (thiol)-lyase; protein synonym:O-acetylserine sulfhydrylase.
 
  
 
0.918
ahcY
Adenosylhomocysteinase; Protein synonym:S-adenosyl-L-homocysteine hydrolase.
  
 0.857
coaB
Phosphopantothenate--cysteine ligase.
    
  0.815
CSE_02850
Putative ferredoxin.
     
  0.800
thrC-2
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
 
   
 0.766
CSE_03760
Histidinol phosphate phosphatase HisJ family protein; Belongs to the PHP hydrolase family. HisK subfamily.
       0.757
CSE_04690
Peptidase M20 family protein.
 
   
 0.751
CSE_03740
Hypothetical protein; Belongs to the sigma-70 factor family.
       0.736
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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