STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_06200Putative hydrolase. (170 aa)    
Predicted Functional Partners:
pncB
Putative nicotinate phosphoribosyltransferase; Belongs to the NAPRTase family.
 
 0.987
npdA
NAD-dependent deacetylase; Protein synonym:regulatory protein SIR2 homolog.
  
 0.922
CSE_14120
Ribonucleoside hydrolase.
     
 0.907
punA
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.906
bcp-2
Peroxiredoxin; Protein synonym:bacterioferritin comigratory protein.
       0.774
CSE_06180
Hypothetical protein.
       0.773
CSE_06190
Hypothetical protein.
       0.773
CSE_06220
Putative hydrolase.
       0.716
CSE_06170
Hypothetical protein.
       0.709
CSE_06230
Oligopeptide transporter OPT family protein.
       0.705
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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