STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_07650Hypothetical protein. (506 aa)    
Predicted Functional Partners:
CSE_07610
Hypothetical protein.
       0.773
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.773
CSE_07630
Hypothetical protein.
       0.773
CSE_07640
Deoxynucleoside kinase.
       0.773
CSE_07660
Hypothetical protein.
       0.773
CSE_07670
Hypothetical protein.
       0.773
surA
Putative peptidyl-prolyl cis-trans isomerase SurA; Protein synonym:PPIase SurA; protein synonym:chaperone SurA precursor; protein synonym:rotamase SurA.
       0.773
CSE_07690
Lipoate-protein ligase A subunit 1.
       0.752
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.527
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.527
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.