STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_08870Rubrerythrin. (167 aa)    
Predicted Functional Partners:
CSE_08860
Rubredoxin.
  
  
 0.848
CSE_08850
Rubrerythrin family protein; Fragment.
  
  
 0.831
CSE_12410
Putative flavoprotein.
 
  
 0.630
CSE_08940
Putative signaling protein.
     
 0.614
iscS
Cysteine desulfurase; Protein synonym:NifS protein homolog; protein synonym:ThiI transpersulfidase.
       0.612
iscU-2
Putative iron-sulfur cluster assembly protein IscU.
       0.604
CSE_08890
Hypothetical protein.
       0.603
CSE_08930
Hypothetical protein.
       0.603
CSE_15540
Putative peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.603
CSE_08880
Putative molybdopterin synthesis protein.
       0.601
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.